Yet another tool to explore PDB data (v0.5, 2004)

Last bank update: July 2005

This tools is designed on the top of a database maintained at EBGM, and storing informations about each chain of the Protein Data Bank (PDB).
It is moslty desgined to build or merge lists of protein chains under conditions.
Search options:
Type:
Exp. Method:
Alternative coordinates:
Obsolete:
max. Resolution:
Disulfide bonds:
Alpha C. only:
max. RValue:
Backbone:
Fragmented:
Bck. geometry:
Side Chains:
Min. chain length :
Alpha C. geometry:
CIS conformations:
 
%Identity max :
If you specify a list, it will be confronted with the results of the search in the database.
(file format: one Id per line, e.g. 1timA for chain A of 1tim)
select "check conditions" to extract chains of the list mathcing the conditions.
select "enrich" to merge new chains matching that conditions to your list.
select "newcomers" to get chains not in your list and matching the conditions.
List PDB Ids apply to