Part B - The different type of results

Four different types of outputs are available for the results:

short results, with only the sequence and the prediction in terms of Protein Blocks.
normal results, with the sequence, the prediction in terms of Protein Blocks and an index derived from the entropy-based index Neq to evaluate the results of prediction.
complete results, with amino acid sequence, the local structure prediction in terms of Protein Blocks and the whole Protein Blocks with their associated probabilities.
color visualisation of the prediction scores.

short results :

prediction: the prediction in terms of Protein Blocks with only the most probable Protein Blocks.

prediction: the prediction in terms of Protein Blocks with only the most probable Protein Blocks.

normalised Neq: the entropy-based index Neq varies between 1 (sequence of high informativity) and 16 (sequence without informativity). Warning: the scale has been normalized - for clarity purpose - in the range [0:9] instead of the classical [1:16].

prediction: the prediction in terms of Protein Blocks with only the most probable Protein Blocks.

complete prediction: the prediction with all the information, with (from left to right) the position of the residue in the sequence, the local Neq (in the range [1:16]) and then by decreasing order the 16 Protein Blocks with their associated probability (the sum of all probability is 1, the symbol --- is for probability less than 0.01).

complete prediction and the new Sequence families: With the new sequence families complete prediction is given too the expected prediction rate. This value is obtained from a linear regression which uses the average Neq of the prediction. The standard deviation equals only 5%.

colors: The colors are directly related to the score prediction and goes from red (probability = 1.0) to dark blue (probability < 0.01).

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Last modif : 11 April 2004